Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | SAMN05444680_11533 | Not Available | Negative | 5608889 - 5609434 | 20203.8 |
| peptidase propeptide and ypeb domain-containing protein | SAMN05444680_11534 | Not Available | Negative | 5609445 - 5609747 | 11028.3 |
| pkhd-type hydroxylase | SAMN05444680_11535 | Not Available | Negative | 5609796 - 5610482 | 25829.7 |
| catecholate siderophore receptor | SAMN05444680_11536 | Not Available | Negative | 5610496 - 5612715 | 80785.6 |
| ferric uptake regulator family protein | SAMN05444680_11537 | Not Available | Positive | 5613104 - 5613520 | 14938.8 |
| hypothetical protein | SAMN05444680_11538 | Not Available | Negative | 5613553 - 5614299 | 26664.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11539 | Not Available | Positive | 5614396 - 5615283 | 31710.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444680_11540 | Not Available | Positive | 5615363 - 5617378 | 71713.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11541 | Not Available | Positive | 5617405 - 5618397 | 34006.6 |
| phosphatidylserine decarboxylase | SAMN05444680_11542 | Not Available | Negative | 5618351 - 5619283 | 34429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
