Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05444680_101481 | Not Available | Negative | 497913 - 498899 | 34920.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05444680_101482 | Not Available | Negative | 498914 - 499444 | 19912.8 |
| beta-barrel assembly machine subunit bama | SAMN05444680_101483 | Not Available | Negative | 499444 - 501870 | 90203.9 |
| site-2 protease. metallo peptidase. merops family m50b | SAMN05444680_101484 | Not Available | Negative | 501910 - 503280 | 49436.8 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05444680_101485 | Not Available | Negative | 503306 - 504493 | 41956.7 |
| phosphatidate cytidylyltransferase | SAMN05444680_101486 | Not Available | Negative | 504490 - 505335 | 29991.7 |
| undecaprenyl diphosphate synthase | SAMN05444680_101487 | Not Available | Negative | 505340 - 506071 | 26694.8 |
| ribosome recycling factor | SAMN05444680_101488 | Not Available | Negative | 506074 - 506634 | 20791.1 |
| uridylate kinase | SAMN05444680_101489 | Not Available | Negative | 506648 - 507370 | 25438.1 |
| translation elongation factor ts (ef-ts) | SAMN05444680_101490 | Not Available | Negative | 507466 - 508392 | 32620.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
