Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine aldolase | SAMN05444680_114154 | Not Available | Positive | 5573654 - 5574709 | 37384.6 |
| anthranilate phosphoribosyltransferase | SAMN05444680_114155 | Not Available | Positive | 5574762 - 5575790 | 35990.8 |
| indole-3-glycerol phosphate synthase | SAMN05444680_114156 | Not Available | Positive | 5575805 - 5576605 | 28598.5 |
| uracil-dna glycosylase | SAMN05444680_114157 | Not Available | Positive | 5576602 - 5577300 | 25211.4 |
| Trna-tyr | Not Available | Not Available | Positive | 5577445 - 5577530 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5577641 - 5577714 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5577753 - 5577827 | Not Available |
| elongation factor tu | SAMN05444680_114161 | Not Available | Positive | 5577902 - 5577993 | 3274.99 |
| arginine deiminase | SAMN05444680_1151 | Not Available | Positive | 5577994 - 5578191 | 7031.4 |
| o-acetylserine/cysteine efflux transporter | SAMN05444680_1152 | Not Available | Negative | 5578484 - 5579401 | 31953.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
