Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase prpc | SAMN05444680_114144 | Not Available | Positive | 5563096 - 5563869 | 27551.4 |
| hypothetical protein | SAMN05444680_114145 | Not Available | Negative | 5563889 - 5564320 | 15454.5 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN05444680_114146 | Not Available | Positive | 5564400 - 5566460 | 73894.5 |
| type vi secretion system protein impl | SAMN05444680_114147 | Not Available | Negative | 5566477 - 5567619 | 41419.1 |
| type iv / vi secretion system protein, dotu family | SAMN05444680_114148 | Not Available | Negative | 5567630 - 5568955 | 48085.4 |
| two component transcriptional regulator, luxr family | SAMN05444680_114149 | Not Available | Positive | 5569193 - 5569867 | 23813.2 |
| phosphoglycolate phosphatase | SAMN05444680_114150 | Not Available | Positive | 5569975 - 5570652 | 24381.1 |
| chalcone isomerase-like | SAMN05444680_114151 | Not Available | Negative | 5570660 - 5571250 | 21089.7 |
| anthranilate synthase, component i | SAMN05444680_114152 | Not Available | Positive | 5571481 - 5573034 | 57034.7 |
| anthranilate synthase, component ii | SAMN05444680_114153 | Not Available | Positive | 5573031 - 5573645 | 22231.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
