Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_114134 | Not Available | Positive | 5551195 - 5551881 | 24387.6 |
| signal transduction histidine kinase | SAMN05444680_114135 | Not Available | Negative | 5551897 - 5553900 | 71088.7 |
| putative abc transport system substrate-binding protein | SAMN05444680_114136 | Not Available | Negative | 5553897 - 5554892 | 34406.8 |
| signal transduction histidine kinase | SAMN05444680_114137 | Not Available | Negative | 5555066 - 5556955 | 68384.4 |
| phosphonate transport system substrate-binding protein | SAMN05444680_114138 | Not Available | Positive | 5557091 - 5558176 | 39898.0 |
| phosphonate transport system substrate-binding protein | SAMN05444680_114139 | Not Available | Positive | 5558133 - 5559194 | 39487.4 |
| core-2/i-branching enzyme | SAMN05444680_114140 | Not Available | Negative | 5559209 - 5560129 | 36194.5 |
| type vi secretion system protein impm | SAMN05444680_114141 | Not Available | Positive | 5560295 - 5560945 | 23729.9 |
| enoyl-coa hydratase | SAMN05444680_114142 | Not Available | Negative | 5560965 - 5561756 | 27040.6 |
| hypothetical protein | SAMN05444680_114143 | Not Available | Positive | 5561901 - 5563076 | 42197.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
