Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444680_114124 | Not Available | Negative | 5538423 - 5539310 | 32947.5 |
| catalase | SAMN05444680_114125 | Not Available | Positive | 5539550 - 5541727 | 80106.2 |
| zinc carboxypeptidase | SAMN05444680_114126 | Not Available | Positive | 5541975 - 5542949 | 36721.5 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444680_114127 | Not Available | Positive | 5542946 - 5543743 | 28691.4 |
| glycine zipper 2tm domain-containing protein | SAMN05444680_114128 | Not Available | Negative | 5543697 - 5544407 | 23574.4 |
| signal transduction histidine kinase | SAMN05444680_114129 | Not Available | Positive | 5544622 - 5548089 | 127558.0 |
| chemotaxis protein methyltransferase cher | SAMN05444680_114130 | Not Available | Positive | 5548086 - 5548937 | 32023.3 |
| cheb methylesterase | SAMN05444680_114131 | Not Available | Positive | 5548934 - 5549560 | 21787.3 |
| signal transduction histidine kinase | SAMN05444680_114132 | Not Available | Positive | 5549550 - 5550755 | 44836.0 |
| response regulator receiver domain-containing protein | SAMN05444680_114133 | Not Available | Positive | 5550842 - 5551198 | 12500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
