Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para-nitrobenzyl esterase | SAMN05444680_114104 | Not Available | Negative | 5513548 - 5515335 | 63150.9 |
| phenylacetic acid degradation protein | SAMN05444680_114105 | Not Available | Negative | 5515452 - 5516054 | 21272.9 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05444680_114106 | Not Available | Positive | 5516241 - 5517041 | 27465.3 |
| acyl-coa thioesterase | SAMN05444680_114107 | Not Available | Positive | 5517050 - 5517490 | 15884.8 |
| phenylacetate-coa ligase | SAMN05444680_114108 | Not Available | Positive | 5517511 - 5518830 | 48890.7 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paaa | SAMN05444680_114109 | Not Available | Positive | 5518874 - 5519884 | 38052.2 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paab | SAMN05444680_114110 | Not Available | Positive | 5519910 - 5520227 | 11947.0 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paac | SAMN05444680_114111 | Not Available | Positive | 5520238 - 5521011 | 28975.5 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paad | SAMN05444680_114112 | Not Available | Positive | 5521008 - 5521523 | 18561.2 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN05444680_114113 | Not Available | Positive | 5521542 - 5522627 | 39806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
