Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_11494 | Not Available | Positive | 5503897 - 5504802 | 32606.7 |
| hypothetical protein | SAMN05444680_11495 | Not Available | Negative | 5504818 - 5505072 | 9274.08 |
| two component transcriptional regulator, luxr family | SAMN05444680_11496 | Not Available | Positive | 5505169 - 5505789 | 22172.9 |
| signal transduction histidine kinase | SAMN05444680_11497 | Not Available | Positive | 5505789 - 5507606 | 64947.8 |
| thiamine-phosphate kinase | SAMN05444680_11498 | Not Available | Negative | 5507632 - 5508600 | 33401.0 |
| carboxylate-amine ligase | SAMN05444680_11499 | Not Available | Negative | 5508608 - 5509822 | 45730.7 |
| transporter, cpa2 family | SAMN05444680_114100 | Not Available | Negative | 5509884 - 5511152 | 44429.5 |
| apag protein | SAMN05444680_114101 | Not Available | Negative | 5511297 - 5511695 | 14406.0 |
| ribulose-phosphate 3-epimerase | SAMN05444680_114102 | Not Available | Positive | 5511732 - 5512427 | 24540.4 |
| succinylglutamate desuccinylase / aspartoacylase family protein | SAMN05444680_114103 | Not Available | Positive | 5512530 - 5513528 | 36192.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
