Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like domain-containing protein | SAMN05444680_11484 | Not Available | Negative | 5493089 - 5493574 | 17823.1 |
| major type 1 subunit fimbrin (pilin) | SAMN05444680_11485 | Not Available | Positive | 5493876 - 5494448 | 18819.8 |
| chaperone protein ecpd | SAMN05444680_11486 | Not Available | Positive | 5494551 - 5495282 | 26183.5 |
| outer membrane usher protein | SAMN05444680_11487 | Not Available | Positive | 5495289 - 5497931 | 91808.1 |
| p pilus assembly protein, chaperone papd | SAMN05444680_11488 | Not Available | Positive | 5497935 - 5498810 | 31873.3 |
| pilin (type 1 fimbria component protein) | SAMN05444680_11489 | Not Available | Positive | 5498807 - 5499946 | 39575.2 |
| nicotinamide-nucleotide amidase | SAMN05444680_11490 | Not Available | Negative | 5500003 - 5500518 | 17850.3 |
| phosphatidylglycerophosphatase a | SAMN05444680_11491 | Not Available | Negative | 5500512 - 5501102 | 21507.5 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_11492 | Not Available | Negative | 5501136 - 5502806 | 61264.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11493 | Not Available | Negative | 5502814 - 5503803 | 33530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
