Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_101471 | Not Available | Negative | 487676 - 488089 | 15123.0 |
| transcription elongation factor grea | SAMN05444680_101472 | Not Available | Negative | 488101 - 488577 | 16971.9 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | SAMN05444680_101473 | Not Available | Negative | 488641 - 489510 | 32697.3 |
| carbamoyl-phosphate synthase large subunit | SAMN05444680_101474 | Not Available | Negative | 489528 - 492755 | 117170.0 |
| carbamoyl-phosphate synthase small subunit | SAMN05444680_101475 | Not Available | Negative | 492748 - 493932 | 42463.0 |
| rna methyltransferase, trmh family | SAMN05444680_101476 | Not Available | Negative | 494070 - 494846 | 27549.1 |
| rnase hii | SAMN05444680_101477 | Not Available | Negative | 494843 - 495544 | 24949.3 |
| lipid-a-disaccharide synthase | SAMN05444680_101478 | Not Available | Negative | 495516 - 496664 | 41882.4 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05444680_101479 | Not Available | Negative | 496673 - 497461 | 27909.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05444680_101480 | Not Available | Negative | 497473 - 497916 | 16527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
