Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN05444680_11464 | Not Available | Positive | 5473672 - 5474130 | 16926.3 |
| hypothetical protein | SAMN05444680_11465 | Not Available | Positive | 5474135 - 5476165 | 73735.1 |
| hypothetical protein | SAMN05444680_11466 | Not Available | Negative | 5476296 - 5476559 | 8918.94 |
| arginyl-trna synthetase | SAMN05444680_11467 | Not Available | Positive | 5476693 - 5478366 | 61223.6 |
| cell division protein ftsn | SAMN05444680_11468 | Not Available | Positive | 5478381 - 5479154 | 26361.1 |
| thiol:disulfide interchange protein dsba | SAMN05444680_11469 | Not Available | Positive | 5479237 - 5479878 | 23436.3 |
| lipopolysaccharide export system protein lpta | SAMN05444680_11470 | Not Available | Positive | 5480010 - 5480708 | 24519.0 |
| lipopolysaccharide export system atp-binding protein | SAMN05444680_11471 | Not Available | Positive | 5480705 - 5481499 | 29138.2 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN05444680_11472 | Not Available | Positive | 5481521 - 5483104 | 58334.7 |
| polyisoprenoid-binding protein ycei | SAMN05444680_11473 | Not Available | Negative | 5483155 - 5483631 | 17250.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
