Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | SAMN05444680_11434 | Not Available | Negative | 5436874 - 5438172 | 47976.6 |
| glycogen operon protein | SAMN05444680_11435 | Not Available | Negative | 5438235 - 5440274 | 75536.2 |
| 1,4-alpha-glucan branching enzyme | SAMN05444680_11436 | Not Available | Negative | 5440271 - 5442430 | 81092.0 |
| alpha-glucosidase | SAMN05444680_11437 | Not Available | Negative | 5442420 - 5444051 | 60842.3 |
| leucyl-trna synthetase | SAMN05444680_11438 | Not Available | Positive | 5444245 - 5446884 | 98413.6 |
| lps-assembly lipoprotein | SAMN05444680_11439 | Not Available | Positive | 5446890 - 5447399 | 18460.3 |
| dna polymerase iii, delta subunit | SAMN05444680_11440 | Not Available | Positive | 5447528 - 5448574 | 37983.6 |
| glutamate-5-semialdehyde dehydrogenase | SAMN05444680_11441 | Not Available | Positive | 5448735 - 5450015 | 45013.2 |
| glutamate--cysteine ligase | SAMN05444680_11442 | Not Available | Positive | 5450212 - 5451507 | 48116.1 |
| kup system potassium uptake protein | SAMN05444680_11443 | Not Available | Positive | 5451660 - 5453528 | 68097.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
