Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sigma-54 modulation protein | SAMN05444680_11424 | Not Available | Positive | 5427537 - 5427866 | 12697.2 |
| pts iia-like nitrogen-regulatory protein ptsn | SAMN05444680_11425 | Not Available | Positive | 5427961 - 5428428 | 16476.0 |
| hpr(ser) kinase/phosphatase | SAMN05444680_11426 | Not Available | Positive | 5428555 - 5429514 | 35619.4 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05444680_11427 | Not Available | Negative | 5429522 - 5429941 | 15880.0 |
| beta-barrel assembly machine subunit bame | SAMN05444680_11428 | Not Available | Positive | 5430027 - 5430593 | 20987.8 |
| dihydrodipicolinate reductase | SAMN05444680_11429 | Not Available | Positive | 5430661 - 5431491 | 28814.7 |
| biopolymer transport protein exbb | SAMN05444680_11430 | Not Available | Positive | 5431640 - 5432338 | 24392.0 |
| biopolymer transport protein tolr | SAMN05444680_11431 | Not Available | Positive | 5432342 - 5432806 | 16099.5 |
| glycogen phosphorylase | SAMN05444680_11432 | Not Available | Negative | 5432921 - 5435377 | 92800.5 |
| starch synthase | SAMN05444680_11433 | Not Available | Negative | 5435407 - 5436867 | 52540.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
