Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN05444680_11414 | Not Available | Positive | 5415396 - 5417075 | 60711.6 |
| dipeptide transport system permease protein | SAMN05444680_11415 | Not Available | Positive | 5417126 - 5418136 | 36691.2 |
| dipeptide transport system permease protein | SAMN05444680_11416 | Not Available | Positive | 5418133 - 5419029 | 31143.1 |
| hypothetical protein | SAMN05444680_11417 | Not Available | Positive | 5419026 - 5419184 | 5553.78 |
| dipeptide transport system atp-binding protein | SAMN05444680_11418 | Not Available | Positive | 5419186 - 5420205 | 37231.5 |
| dipeptide transport system atp-binding protein | SAMN05444680_11419 | Not Available | Positive | 5420264 - 5421283 | 37140.4 |
| dipeptide transport system substrate-binding protein | SAMN05444680_11420 | Not Available | Positive | 5421298 - 5422926 | 60564.4 |
| adenosylhomocysteine nucleosidase | SAMN05444680_11421 | Not Available | Positive | 5423006 - 5423782 | 27111.3 |
| magnesium transporter | SAMN05444680_11422 | Not Available | Negative | 5423897 - 5424883 | 37907.4 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05444680_11423 | Not Available | Positive | 5425034 - 5427208 | 79905.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
