Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short c-terminal domain-containing protein | SAMN05444680_1144 | Not Available | Positive | 5404129 - 5404506 | 13812.1 |
| putative cardiolipin synthase | SAMN05444680_1145 | Not Available | Negative | 5404507 - 5406072 | 56030.4 |
| luciferase family oxidoreductase, group 1 | SAMN05444680_1146 | Not Available | Positive | 5406150 - 5407148 | 36065.2 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05444680_1147 | Not Available | Positive | 5407203 - 5408312 | 40731.0 |
| nudix domain-containing protein | SAMN05444680_1148 | Not Available | Negative | 5408322 - 5408801 | 17639.1 |
| sensor domain chase2-containing protein | SAMN05444680_1149 | Not Available | Negative | 5408809 - 5411103 | 82917.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_11410 | Not Available | Negative | 5411175 - 5411918 | 28061.5 |
| nad(p) transhydrogenase subunit alpha | SAMN05444680_11411 | Not Available | Positive | 5412197 - 5413327 | 39054.4 |
| nad(p) transhydrogenase subunit alpha | SAMN05444680_11412 | Not Available | Positive | 5413364 - 5413693 | 11428.5 |
| nad(p) transhydrogenase subunit beta | SAMN05444680_11413 | Not Available | Positive | 5413695 - 5415182 | 51906.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
