Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05444680_113160 | Not Available | Negative | 5384432 - 5385439 | 37036.4 |
| acetyl-coa synthetase | SAMN05444680_113161 | Not Available | Negative | 5385436 - 5387217 | 64632.6 |
| l-alanine dehydrogenase | SAMN05444680_113162 | Not Available | Positive | 5387396 - 5388523 | 39077.2 |
| arsenite efflux atp-binding protein arsa | SAMN05444680_113163 | Not Available | Positive | 5388893 - 5390920 | 71580.1 |
| uncharacterized conserved protein, duf302 family | SAMN05444680_113164 | Not Available | Positive | 5390950 - 5391360 | 14348.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_113165 | Not Available | Negative | 5391475 - 5392452 | 34254.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_113166 | Not Available | Negative | 5392471 - 5393472 | 34751.2 |
| transcriptional regulator, iclr family | SAMN05444680_113167 | Not Available | Negative | 5393629 - 5394402 | 28212.1 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit/benzoate/toluate 1,2-dioxygenase reductase subunit | SAMN05444680_113168 | Not Available | Positive | 5394531 - 5395526 | 35347.0 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_113169 | Not Available | Positive | 5395569 - 5396936 | 52351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
