Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph2:quinone reductase | SAMN05444680_113150 | Not Available | Negative | 5376526 - 5377518 | 34085.4 |
| amino acid synthesis | SAMN05444680_113151 | Not Available | Negative | 5377550 - 5378128 | 20866.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_113152 | Not Available | Negative | 5378139 - 5379110 | 33713.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_113153 | Not Available | Negative | 5379208 - 5380071 | 31406.6 |
| catechol 2,3-dioxygenase | SAMN05444680_113154 | Not Available | Negative | 5380124 - 5380675 | 20539.3 |
| transcriptional regulator, gntr family | SAMN05444680_113155 | Not Available | Negative | 5380741 - 5381439 | 26022.8 |
| hypothetical protein | SAMN05444680_113156 | Not Available | Positive | 5381658 - 5381882 | 8191.92 |
| acyl carrier protein | SAMN05444680_113157 | Not Available | Negative | 5382083 - 5382322 | 8564.24 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05444680_113158 | Not Available | Negative | 5382319 - 5383443 | 39326.4 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN05444680_113159 | Not Available | Negative | 5383446 - 5384435 | 35453.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
