Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, crp/fnr family | SAMN05444680_101461 | Not Available | Positive | 477696 - 478415 | 26711.3 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN05444680_101462 | Not Available | Positive | 478427 - 479515 | 40555.7 |
| acyl-coa dehydrogenase | SAMN05444680_101463 | Not Available | Positive | 479560 - 480831 | 46407.7 |
| acetyltransferase (gnat) family protein | SAMN05444680_101464 | Not Available | Negative | 480884 - 481375 | 17488.0 |
| phosphoglucosamine mutase | SAMN05444680_101465 | Not Available | Negative | 481372 - 482706 | 47287.7 |
| dihydropteroate synthase | SAMN05444680_101466 | Not Available | Negative | 482703 - 483563 | 30724.2 |
| membrane protease ftsh catalytic subunit | SAMN05444680_101467 | Not Available | Negative | 483625 - 485541 | 70206.7 |
| 23s rrna um-2552 2'-o-methyltransferase | SAMN05444680_101468 | Not Available | Negative | 485723 - 486376 | 23741.7 |
| putative rna-binding protein, yhby family | SAMN05444680_101469 | Not Available | Positive | 486396 - 486875 | 17745.8 |
| hypothetical protein | SAMN05444680_101470 | Not Available | Positive | 486878 - 487642 | 29946.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
