Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05444680_113140 | Not Available | Positive | 5369149 - 5369565 | 15060.9 |
| transcriptional regulator, lysr family | SAMN05444680_113141 | Not Available | Positive | 5369632 - 5370564 | 34238.8 |
| hypothetical protein | SAMN05444680_113142 | Not Available | Negative | 5370561 - 5370668 | 3829.64 |
| fumarylpyruvate hydrolase | SAMN05444680_113143 | Not Available | Negative | 5370665 - 5371375 | 25618.5 |
| mfs transporter, aahs family, benzoate transport protein | SAMN05444680_113144 | Not Available | Negative | 5371390 - 5372754 | 48332.3 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05444680_113145 | Not Available | Negative | 5372796 - 5374049 | 44485.2 |
| naphthalene 1,2-dioxygenase system ferredoxin subunit | SAMN05444680_113146 | Not Available | Negative | 5374074 - 5374388 | 11287.3 |
| salicylate 5-hydroxylase small subunit | SAMN05444680_113147 | Not Available | Negative | 5374402 - 5374878 | 18520.9 |
| salicylate 5-hydroxylase large subunit | SAMN05444680_113148 | Not Available | Negative | 5374878 - 5376140 | 48119.9 |
| hypothetical protein | SAMN05444680_113149 | Not Available | Positive | 5376347 - 5376514 | 6044.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
