Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopenicillin n synthase | SAMN05444680_113110 | Not Available | Negative | 5336889 - 5337893 | 37199.5 |
| nitt/taut family transport system permease protein | SAMN05444680_113111 | Not Available | Negative | 5337927 - 5338748 | 29374.7 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_113112 | Not Available | Negative | 5338748 - 5339545 | 28891.1 |
| adenosine deaminase | SAMN05444680_113113 | Not Available | Negative | 5339542 - 5340579 | 38264.7 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_113114 | Not Available | Negative | 5340592 - 5341710 | 39382.9 |
| d-amino-acid dehydrogenase | SAMN05444680_113115 | Not Available | Negative | 5341943 - 5343181 | 44376.2 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_113116 | Not Available | Negative | 5343201 - 5343554 | 12257.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_113117 | Not Available | Negative | 5343666 - 5344589 | 33796.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_113118 | Not Available | Positive | 5344722 - 5345711 | 34048.4 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN05444680_113119 | Not Available | Positive | 5345708 - 5347261 | 55021.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
