Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_113100 | Not Available | Positive | 5328222 - 5328362 | 5117.87 |
| type vi secretion system protein impa | SAMN05444680_113101 | Not Available | Positive | 5328389 - 5328694 | 11278.4 |
| fha domain-containing protein | SAMN05444680_113102 | Not Available | Negative | 5328723 - 5329145 | 15103.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_113103 | Not Available | Negative | 5329224 - 5330147 | 33571.1 |
| hypothetical protein | SAMN05444680_113104 | Not Available | Positive | 5330240 - 5330698 | 17231.5 |
| transcriptional regulator, lysr family | SAMN05444680_113105 | Not Available | Negative | 5330723 - 5331661 | 34425.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_113106 | Not Available | Positive | 5331767 - 5332756 | 34561.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05444680_113107 | Not Available | Positive | 5332782 - 5333807 | 35692.9 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05444680_113108 | Not Available | Negative | 5333825 - 5335432 | 59319.1 |
| mode molybdate transport repressor domain-containing protein | SAMN05444680_113109 | Not Available | Positive | 5335935 - 5336879 | 35088.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
