Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport system permease protein | SAMN05444680_11390 | Not Available | Positive | 5314591 - 5315424 | 30539.1 |
| hypothetical protein | SAMN05444680_11391 | Not Available | Positive | 5315510 - 5315725 | 7571.97 |
| outer membrane protein, multidrug efflux system | SAMN05444680_11392 | Not Available | Negative | 5315735 - 5317147 | 51044.4 |
| multidrug efflux pump | SAMN05444680_11393 | Not Available | Negative | 5317140 - 5320349 | 114449.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_11394 | Not Available | Negative | 5320364 - 5321479 | 39464.0 |
| pas domain s-box-containing protein | SAMN05444680_11395 | Not Available | Negative | 5321632 - 5323557 | 71085.0 |
| sulfonate transport system substrate-binding protein | SAMN05444680_11396 | Not Available | Positive | 5323739 - 5324701 | 34053.2 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN05444680_11397 | Not Available | Negative | 5324717 - 5326033 | 48352.0 |
| sulfonate transport system substrate-binding protein | SAMN05444680_11398 | Not Available | Negative | 5326048 - 5327070 | 36799.8 |
| alcohol dehydrogenase, propanol-preferring | SAMN05444680_11399 | Not Available | Positive | 5327213 - 5328202 | 34714.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
