Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11380 | Not Available | Positive | 5304338 - 5305042 | 24938.1 |
| rimk-like atp-grasp domain-containing protein | SAMN05444680_11381 | Not Available | Positive | 5305039 - 5305935 | 32499.5 |
| hypothetical protein | SAMN05444680_11382 | Not Available | Negative | 5305993 - 5306937 | 33465.0 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN05444680_11383 | Not Available | Negative | 5307014 - 5309263 | 79709.3 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN05444680_11384 | Not Available | Negative | 5309278 - 5309751 | 16097.4 |
| transcriptional regulator, tetr family | SAMN05444680_11385 | Not Available | Negative | 5309827 - 5310399 | 21327.7 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444680_11386 | Not Available | Negative | 5310499 - 5311368 | 29644.1 |
| putrescine transport system substrate-binding protein | SAMN05444680_11387 | Not Available | Positive | 5311519 - 5312643 | 41302.8 |
| putrescine transport system atp-binding protein | SAMN05444680_11388 | Not Available | Positive | 5312640 - 5313719 | 39391.8 |
| putrescine transport system permease protein | SAMN05444680_11389 | Not Available | Positive | 5313683 - 5314594 | 33354.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
