Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_11350 | Not Available | Negative | 5265215 - 5266927 | 62973.4 |
| carotenoid cleavage dioxygenase | SAMN05444680_11351 | Not Available | Negative | 5266932 - 5268374 | 55225.7 |
| transcriptional regulator, iclr family | SAMN05444680_11352 | Not Available | Positive | 5268462 - 5269271 | 29756.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11353 | Not Available | Negative | 5269308 - 5270288 | 35042.6 |
| protein of unknown function | SAMN05444680_11354 | Not Available | Negative | 5271013 - 5271189 | 6719.17 |
| patatin-like phospholipase | SAMN05444680_11355 | Not Available | Positive | 5272662 - 5273840 | 42258.6 |
| hypothetical protein | SAMN05444680_11356 | Not Available | Negative | 5273851 - 5275872 | 73890.0 |
| hypothetical protein | SAMN05444680_11357 | Not Available | Positive | 5276012 - 5276692 | 23750.2 |
| hypothetical protein | SAMN05444680_11358 | Not Available | Positive | 5276998 - 5277288 | 10179.2 |
| putative chitinase | SAMN05444680_11359 | Not Available | Positive | 5277399 - 5278211 | 28828.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
