Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11340 | Not Available | Positive | 5255483 - 5255701 | 7578.23 |
| fructose-bisphosphate aldolase | SAMN05444680_11341 | Not Available | Negative | 5255608 - 5256633 | 36619.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11342 | Not Available | Negative | 5257340 - 5258326 | 34885.1 |
| dehydrogenase/reductase sdr family member 12 | SAMN05444680_11343 | Not Available | Negative | 5258329 - 5259360 | 37613.0 |
| limonene-1,2-epoxide hydrolase | SAMN05444680_11344 | Not Available | Negative | 5259357 - 5259767 | 15344.5 |
| acetyl-coa c-acetyltransferase | SAMN05444680_11345 | Not Available | Negative | 5259809 - 5261050 | 44622.5 |
| carotenoid cleavage dioxygenase | SAMN05444680_11346 | Not Available | Negative | 5261047 - 5262540 | 56347.6 |
| nitronate monooxygenase | SAMN05444680_11347 | Not Available | Negative | 5262530 - 5263513 | 34294.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11348 | Not Available | Negative | 5263510 - 5264496 | 34868.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_11349 | Not Available | Negative | 5264526 - 5265218 | 24620.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
