Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation/acetate symporter | SAMN05444680_11330 | Not Available | Positive | 5242598 - 5244331 | 60028.2 |
| dna polymerase-3 subunit epsilon | SAMN05444680_11331 | Not Available | Negative | 5244332 - 5244964 | 23738.0 |
| cbs domain-containing protein | SAMN05444680_11332 | Not Available | Negative | 5244961 - 5246802 | 66870.5 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_11333 | Not Available | Negative | 5246841 - 5248076 | 45975.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11334 | Not Available | Negative | 5248092 - 5249108 | 35902.0 |
| transcriptional regulator, lysr family | SAMN05444680_11335 | Not Available | Positive | 5249192 - 5250103 | 33697.8 |
| hemerythrin-like metal-binding domain protein | SAMN05444680_11336 | Not Available | Positive | 5250554 - 5251027 | 17993.3 |
| catechol 2,3-dioxygenase | SAMN05444680_11337 | Not Available | Negative | 5251227 - 5251766 | 20968.0 |
| transcriptional regulator, lysr family | SAMN05444680_11338 | Not Available | Positive | 5251932 - 5252843 | 33181.5 |
| hypothetical protein | SAMN05444680_11339 | Not Available | Positive | 5253204 - 5255210 | 72478.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
