Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | SAMN05444680_11320 | Not Available | Negative | 5231480 - 5232538 | 37352.8 |
| anion transporter | SAMN05444680_11321 | Not Available | Negative | 5232657 - 5234165 | 52832.5 |
| acetyl-coenzyme a synthetase | SAMN05444680_11322 | Not Available | Negative | 5234281 - 5236272 | 72552.4 |
| pas/pac sensor hybrid histidine kinase | SAMN05444680_11323 | Not Available | Positive | 5236488 - 5238479 | 71615.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_11324 | Not Available | Positive | 5238476 - 5239243 | 27886.5 |
| hypothetical protein | SAMN05444680_11325 | Not Available | Positive | 5239298 - 5239630 | 11937.4 |
| serine/threonine-protein kinase hipa | SAMN05444680_11326 | Not Available | Positive | 5239623 - 5240864 | 45876.9 |
| predicted phosphoesterase | SAMN05444680_11327 | Not Available | Positive | 5240900 - 5241649 | 27348.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_11328 | Not Available | Negative | 5241663 - 5242145 | 16710.0 |
| uncharacterized membrane protein, duf485 family | SAMN05444680_11329 | Not Available | Positive | 5242293 - 5242601 | 11478.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
