Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tniq protein | SAMN05444680_11310 | Not Available | Positive | 5219484 - 5221103 | 60163.1 |
| hypothetical protein | SAMN05444680_11311 | Not Available | Positive | 5221507 - 5221875 | 14283.2 |
| tnsa endonuclease n terminal | SAMN05444680_11312 | Not Available | Positive | 5222019 - 5222930 | 34912.5 |
| transposase | SAMN05444680_11313 | Not Available | Negative | 5223199 - 5224797 | 60326.4 |
| is66 orf2 like protein | SAMN05444680_11314 | Not Available | Negative | 5224874 - 5225206 | 12287.2 |
| transposase | SAMN05444680_11315 | Not Available | Negative | 5225203 - 5225628 | 14951.0 |
| integrase core domain-containing protein | SAMN05444680_11316 | Not Available | Positive | 5226210 - 5227709 | 55641.9 |
| hypothetical protein | SAMN05444680_11317 | Not Available | Positive | 5227725 - 5228999 | 47491.7 |
| tniq protein | SAMN05444680_11318 | Not Available | Negative | 5229127 - 5230713 | 58656.4 |
| hypothetical protein | SAMN05444680_11319 | Not Available | Positive | 5230879 - 5231475 | 20586.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
