Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i | SAMN05444680_112186 | Not Available | Positive | 5211995 - 5212812 | 30504.1 |
| hypothetical protein | SAMN05444680_1131 | Not Available | Positive | 5212813 - 5213580 | 29037.2 |
| hypothetical protein | SAMN05444680_1132 | Not Available | Positive | 5214396 - 5214542 | 5360.53 |
| hypothetical protein | SAMN05444680_1133 | Not Available | Negative | 5214626 - 5215222 | 21709.7 |
| hypothetical protein | SAMN05444680_1134 | Not Available | Negative | 5215241 - 5215567 | 12365.0 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN05444680_1135 | Not Available | Negative | 5216105 - 5216605 | 17840.6 |
| hypothetical protein | SAMN05444680_1136 | Not Available | Negative | 5216659 - 5217087 | 16031.2 |
| calcineurin-like phosphoesterase | SAMN05444680_1137 | Not Available | Negative | 5217151 - 5217987 | 31676.6 |
| serine/threonine protein phosphatase 1 | SAMN05444680_1138 | Not Available | Negative | 5217992 - 5218696 | 26140.4 |
| hypothetical protein | SAMN05444680_1139 | Not Available | Negative | 5218898 - 5219050 | 6069.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
