Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_112176 | Not Available | Negative | 5201994 - 5203799 | 63683.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_112177 | Not Available | Negative | 5203796 - 5204770 | 34033.1 |
| formyl-coa transferase | SAMN05444680_112178 | Not Available | Negative | 5204767 - 5205957 | 42318.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_112179 | Not Available | Positive | 5206066 - 5207013 | 33957.6 |
| hemerythrin-like domain-containing protein | SAMN05444680_112180 | Not Available | Positive | 5207052 - 5207633 | 21747.9 |
| nitronate monooxygenase | SAMN05444680_112181 | Not Available | Positive | 5207729 - 5208703 | 34049.1 |
| hypothetical protein | SAMN05444680_112182 | Not Available | Positive | 5208809 - 5209075 | 10122.9 |
| hypothetical protein | SAMN05444680_112183 | Not Available | Positive | 5209190 - 5209285 | 3141.09 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05444680_112184 | Not Available | Negative | 5209375 - 5210505 | 40814.7 |
| cytochrome c | SAMN05444680_112185 | Not Available | Positive | 5210644 - 5211957 | 45603.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
