Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | SAMN05444680_112156 | Not Available | Positive | 5180186 - 5181175 | 35711.8 |
| cupin domain-containing protein | SAMN05444680_112157 | Not Available | Positive | 5181221 - 5181661 | 16236.1 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444680_112158 | Not Available | Positive | 5181952 - 5182839 | 32112.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05444680_112159 | Not Available | Negative | 5183198 - 5183947 | 27507.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444680_112160 | Not Available | Positive | 5184062 - 5185438 | 49584.2 |
| aerobic c4-dicarboxylate transport protein | SAMN05444680_112161 | Not Available | Positive | 5185457 - 5186860 | 48924.0 |
| tripartite tricarboxylate transporter family receptor | SAMN05444680_112162 | Not Available | Positive | 5186955 - 5187356 | 14530.5 |
| fumarase, class ii | SAMN05444680_112163 | Not Available | Positive | 5187358 - 5188788 | 50656.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_112164 | Not Available | Negative | 5188884 - 5189789 | 32651.7 |
| 4,5-dopa dioxygenase extradiol | SAMN05444680_112165 | Not Available | Positive | 5190018 - 5190851 | 29214.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
