Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05444680_112146 | Not Available | Negative | 5168684 - 5169193 | 17781.8 |
| cytochrome c oxidase subunit 2 | SAMN05444680_112147 | Not Available | Positive | 5169215 - 5169937 | 25443.3 |
| cytochrome c oxidase subunit i+iii | SAMN05444680_112148 | Not Available | Positive | 5169934 - 5172471 | 92570.2 |
| hypothetical protein | SAMN05444680_112149 | Not Available | Positive | 5172528 - 5172866 | 12182.3 |
| predicted ferric reductase | SAMN05444680_112150 | Not Available | Positive | 5172874 - 5174184 | 48811.3 |
| transcriptional regulator, tetr family | SAMN05444680_112151 | Not Available | Negative | 5174314 - 5175126 | 29805.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_112152 | Not Available | Positive | 5175286 - 5176125 | 29823.9 |
| catechol-2,3-dioxygenase | SAMN05444680_112153 | Not Available | Positive | 5176216 - 5177163 | 35202.3 |
| single-component resorcinol 4-hydroxylase | SAMN05444680_112154 | Not Available | Positive | 5177202 - 5178851 | 60959.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_112155 | Not Available | Positive | 5178887 - 5180137 | 44267.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
