Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05444680_112136 | Not Available | Negative | 5157856 - 5158854 | 36491.4 |
| taurine dioxygenase | SAMN05444680_112137 | Not Available | Positive | 5159017 - 5159865 | 32006.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_112138 | Not Available | Positive | 5159877 - 5161295 | 53145.5 |
| hypothetical protein | SAMN05444680_112139 | Not Available | Positive | 5161606 - 5161803 | 7156.65 |
| catecholate siderophore receptor | SAMN05444680_112140 | Not Available | Positive | 5162096 - 5164393 | 82566.1 |
| pkhd-type hydroxylase | SAMN05444680_112141 | Not Available | Positive | 5164482 - 5165162 | 25295.2 |
| transcriptional regulator, lysr family | SAMN05444680_112142 | Not Available | Negative | 5165184 - 5166107 | 33813.8 |
| hypothetical protein | SAMN05444680_112143 | Not Available | Positive | 5166238 - 5167356 | 41458.1 |
| putative membrane protein | SAMN05444680_112144 | Not Available | Positive | 5167486 - 5168211 | 25518.9 |
| uncharacterized membrane protein | SAMN05444680_112145 | Not Available | Positive | 5168175 - 5168720 | 20236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
