Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101441 | Not Available | Positive | 460586 - 460930 | 11704.6 |
| hypothetical protein | SAMN05444680_101442 | Not Available | Positive | 461219 - 461563 | 13055.9 |
| superoxide dismutase, fe-mn family | SAMN05444680_101443 | Not Available | Negative | 461635 - 462216 | 21436.3 |
| exodeoxyribonuclease vii large subunit | SAMN05444680_101444 | Not Available | Negative | 462265 - 463578 | 47377.4 |
| biopolymer transport protein exbb | SAMN05444680_101445 | Not Available | Positive | 463890 - 464522 | 22456.5 |
| biopolymer transport protein exbd | SAMN05444680_101446 | Not Available | Positive | 464519 - 464950 | 15492.7 |
| lipid-a-disaccharide kinase | SAMN05444680_101447 | Not Available | Positive | 464953 - 465936 | 35596.1 |
| hypothetical protein | SAMN05444680_101448 | Not Available | Positive | 465917 - 466099 | 6676.14 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05444680_101449 | Not Available | Positive | 466108 - 466872 | 27156.4 |
| adenylate kinase | SAMN05444680_101450 | Not Available | Positive | 466981 - 467637 | 23711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
