Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | SAMN05444680_102694 | Not Available | Negative | 1732981 - 1733181 | 7107.65 |
| Head completion/stabilization protein | SAMN05444680_102695 | Not Available | Negative | 1733181 - 1733651 | 17340.7 |
| Putative small terminase subunit | SAMN05444680_102696 | Not Available | Negative | 1733761 - 1734468 | 25970.3 |
| Capsid protein | SAMN05444680_102697 | Not Available | Negative | 1734473 - 1735480 | 37174.3 |
| Capsid scaffolding protein | SAMN05444680_102698 | Not Available | Negative | 1735523 - 1736365 | 30729.1 |
| Gp35 | SAMN05444680_102699 | Not Available | Positive | 1736531 - 1738318 | 67473.5 |
| Portal vertex protein | SAMN05444680_102700 | Not Available | Positive | 1738318 - 1739334 | 38537.5 |
| Dna adenine methylase | SAMN05444680_102701 | Not Available | Positive | 1739382 - 1740152 | 29298.4 |
| Attr | Not Available | Not Available | Positive | 1742764 - 1742811 | Not Available |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 55 - 167 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
