Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase (class 2) | SAMN05444680_112116 | Not Available | Negative | 5134865 - 5135872 | 35532.8 |
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMN05444680_112117 | Not Available | Negative | 5136009 - 5138105 | 75872.2 |
| hypothetical protein | SAMN05444680_112118 | Not Available | Positive | 5138314 - 5138955 | 24038.9 |
| hypothetical protein | SAMN05444680_112119 | Not Available | Positive | 5138976 - 5139497 | 18830.6 |
| uncharacterized conserved protein, contains gh25 family domain | SAMN05444680_112120 | Not Available | Positive | 5139530 - 5140330 | 28709.1 |
| thiamine biosynthesis lipoprotein | SAMN05444680_112121 | Not Available | Positive | 5140456 - 5141367 | 32276.3 |
| sulfite reductase (nadph) flavoprotein alpha-component | SAMN05444680_112122 | Not Available | Positive | 5141364 - 5142731 | 49028.7 |
| hypothetical protein | SAMN05444680_112123 | Not Available | Positive | 5143003 - 5143212 | 7939.37 |
| arac-type dna-binding protein | SAMN05444680_112124 | Not Available | Negative | 5143419 - 5144489 | 39146.4 |
| two-component response regulator, fixj family, consists of rec and hth domains | SAMN05444680_112125 | Not Available | Negative | 5144476 - 5144991 | 18782.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
