Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pgap1-like protein | SAMN05444680_112106 | Not Available | Negative | 5122585 - 5123385 | 29470.4 |
| transcriptional regulator, crp/fnr family | SAMN05444680_112107 | Not Available | Positive | 5123548 - 5124246 | 26107.2 |
| predicted secreted hydrolase | SAMN05444680_112108 | Not Available | Negative | 5124386 - 5125591 | 43723.8 |
| protein of unknown function | SAMN05444680_112109 | Not Available | Positive | 5125742 - 5126155 | 14201.7 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444680_112110 | Not Available | Negative | 5126205 - 5127116 | 32219.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_112111 | Not Available | Negative | 5127133 - 5128131 | 34552.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_112112 | Not Available | Negative | 5128142 - 5129122 | 33820.1 |
| hypothetical protein | SAMN05444680_112113 | Not Available | Negative | 5129260 - 5130651 | 51452.0 |
| hypothetical protein | SAMN05444680_112114 | Not Available | Negative | 5130668 - 5134258 | 134650.0 |
| nadph-dependent fmn reductase | SAMN05444680_112115 | Not Available | Negative | 5134324 - 5134824 | 17777.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
