Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf2252 family | SAMN05444680_11296 | Not Available | Negative | 5109770 - 5111116 | 50614.4 |
| porin | SAMN05444680_11297 | Not Available | Negative | 5111119 - 5112426 | 47028.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444680_11298 | Not Available | Negative | 5112440 - 5113717 | 46833.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_11299 | Not Available | Positive | 5113922 - 5114629 | 26056.8 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444680_112100 | Not Available | Negative | 5114720 - 5116357 | 58991.7 |
| multiple antibiotic resistance protein | SAMN05444680_112101 | Not Available | Negative | 5116407 - 5117024 | 22212.6 |
| acyltransferase, ws/dgat/mgat | SAMN05444680_112102 | Not Available | Negative | 5117148 - 5118581 | 52326.4 |
| long-chain acyl-coa synthetase | SAMN05444680_112103 | Not Available | Negative | 5118601 - 5120313 | 61982.7 |
| sugar phosphate permease | SAMN05444680_112104 | Not Available | Positive | 5120801 - 5121889 | 39263.8 |
| predicted hd phosphohydrolase | SAMN05444680_112105 | Not Available | Positive | 5121926 - 5122537 | 23238.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
