Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11286 | Not Available | Negative | 5098104 - 5098598 | 17288.1 |
| nte family protein | SAMN05444680_11287 | Not Available | Positive | 5098678 - 5100141 | 52577.7 |
| hypothetical protein | SAMN05444680_11288 | Not Available | Positive | 5100207 - 5100671 | 15193.7 |
| protein of unknown function | SAMN05444680_11289 | Not Available | Positive | 5100776 - 5102716 | 70658.2 |
| hypothetical protein | SAMN05444680_11290 | Not Available | Positive | 5102759 - 5103640 | 32137.2 |
| hupe / urej protein | SAMN05444680_11291 | Not Available | Positive | 5103637 - 5104647 | 36367.0 |
| urease accessory protein | SAMN05444680_11292 | Not Available | Positive | 5104644 - 5105261 | 20667.9 |
| hupe / urej protein | SAMN05444680_11293 | Not Available | Positive | 5105258 - 5105860 | 19872.7 |
| ion channel | SAMN05444680_11294 | Not Available | Positive | 5105966 - 5107081 | 41702.6 |
| phosphoenolpyruvate synthase | SAMN05444680_11295 | Not Available | Positive | 5107319 - 5109748 | 88361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
