Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_11276 | Not Available | Negative | 5090221 - 5091018 | 26938.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11277 | Not Available | Negative | 5091011 - 5092015 | 35872.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444680_11278 | Not Available | Negative | 5092053 - 5093030 | 34738.1 |
| kynurenine formamidase | SAMN05444680_11279 | Not Available | Negative | 5093033 - 5093818 | 29090.3 |
| fumarylacetoacetate (faa) hydrolase | SAMN05444680_11280 | Not Available | Negative | 5093830 - 5094819 | 35383.1 |
| gluconolactonase | SAMN05444680_11281 | Not Available | Negative | 5094816 - 5095928 | 40753.5 |
| transcriptional regulator, lysr family | SAMN05444680_11282 | Not Available | Positive | 5095985 - 5096899 | 34769.1 |
| hypothetical protein | SAMN05444680_11283 | Not Available | Negative | 5096971 - 5097105 | 4782.96 |
| endonuclease yncb, thermonuclease family | SAMN05444680_11284 | Not Available | Negative | 5097106 - 5097630 | 19670.7 |
| hypothetical protein | SAMN05444680_11285 | Not Available | Positive | 5097769 - 5098206 | 15988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
