Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_11256 | Not Available | Negative | 5071248 - 5072450 | 43143.3 |
| hypothetical protein | SAMN05444680_11257 | Not Available | Negative | 5072447 - 5073496 | 39700.2 |
| nadph2:quinone reductase | SAMN05444680_11258 | Not Available | Negative | 5073664 - 5074659 | 34852.9 |
| hypothetical protein | SAMN05444680_11259 | Not Available | Negative | 5074656 - 5074799 | 4841.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11260 | Not Available | Positive | 5075032 - 5076003 | 34059.6 |
| protein-tyrosine phosphatase | SAMN05444680_11261 | Not Available | Negative | 5076014 - 5076739 | 26398.8 |
| acyl dehydratase | SAMN05444680_11262 | Not Available | Negative | 5076739 - 5077611 | 31210.4 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444680_11263 | Not Available | Negative | 5077616 - 5078413 | 28155.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444680_11264 | Not Available | Negative | 5078415 - 5079188 | 27077.7 |
| acetyl-coa c-acetyltransferase | SAMN05444680_11265 | Not Available | Positive | 5079266 - 5080435 | 40609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
