Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-coa dehydrogenase | SAMN05444680_11246 | Not Available | Positive | 5062768 - 5063904 | 40068.0 |
| long-chain acyl-coa synthetase | SAMN05444680_11247 | Not Available | Positive | 5063931 - 5065448 | 56437.7 |
| enoyl-coa hydratase | SAMN05444680_11248 | Not Available | Positive | 5065459 - 5066337 | 31768.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11249 | Not Available | Positive | 5066366 - 5067349 | 34959.2 |
| nitronate monooxygenase | SAMN05444680_11250 | Not Available | Positive | 5067357 - 5068331 | 34133.6 |
| phosphotransferase enzyme family protein | SAMN05444680_11251 | Not Available | Positive | 5068328 - 5069338 | 37007.2 |
| hypothetical protein | SAMN05444680_11252 | Not Available | Positive | 5069352 - 5069717 | 13246.7 |
| tripartite tricarboxylate transporter family receptor | SAMN05444680_11253 | Not Available | Positive | 5069736 - 5070065 | 11685.0 |
| tripartite tricarboxylate transporter family receptor | SAMN05444680_11254 | Not Available | Positive | 5070059 - 5070430 | 12978.5 |
| enoyl-coa hydratase | SAMN05444680_11255 | Not Available | Negative | 5070417 - 5071169 | 25750.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
