Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_11236 | Not Available | Negative | 5052894 - 5054201 | 47294.4 |
| snoal-like domain-containing protein | SAMN05444680_11237 | Not Available | Positive | 5054295 - 5054813 | 19397.9 |
| alpha-methylacyl-coa racemase | SAMN05444680_11238 | Not Available | Negative | 5054820 - 5055968 | 40464.6 |
| hypothetical protein | SAMN05444680_11239 | Not Available | Negative | 5055968 - 5056279 | 11461.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_11240 | Not Available | Positive | 5056363 - 5057331 | 34069.6 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_11241 | Not Available | Negative | 5057318 - 5059066 | 62351.6 |
| methylmuconolactone methyl-isomerase | SAMN05444680_11242 | Not Available | Negative | 5059063 - 5059734 | 24312.8 |
| nadph2:quinone reductase | SAMN05444680_11243 | Not Available | Positive | 5059798 - 5060781 | 34935.1 |
| dna-binding transcriptional regulator, fadr family | SAMN05444680_11244 | Not Available | Negative | 5060785 - 5061534 | 27929.8 |
| pimeloyl-coa dehydrogenase | SAMN05444680_11245 | Not Available | Positive | 5061600 - 5062760 | 43543.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
