Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_11216 | Not Available | Positive | 5032641 - 5033516 | 30296.9 |
| alpha-methylacyl-coa racemase | SAMN05444680_11217 | Not Available | Positive | 5033542 - 5034639 | 39262.9 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_11218 | Not Available | Positive | 5034636 - 5035802 | 39948.5 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_11219 | Not Available | Negative | 5035789 - 5036946 | 39783.6 |
| uncharacterized ob-fold protein, contains zn-ribbon domain | SAMN05444680_11220 | Not Available | Negative | 5036928 - 5037374 | 16781.2 |
| acetyl-coa acetyltransferase | SAMN05444680_11221 | Not Available | Negative | 5037371 - 5038552 | 41868.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444680_11222 | Not Available | Positive | 5038652 - 5039407 | 25809.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase/2-deoxy-d-gluconate 3-dehydrogenase | SAMN05444680_11223 | Not Available | Negative | 5039426 - 5040262 | 29529.8 |
| transcriptional regulator, gntr family | SAMN05444680_11224 | Not Available | Positive | 5040327 - 5041145 | 29713.9 |
| crotonobetaine/carnitine-coa ligase | SAMN05444680_11225 | Not Available | Negative | 5041066 - 5042748 | 61734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
