Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444680_1126 | Not Available | Negative | 5024132 - 5025088 | 34640.2 |
| acetyl-coa acetyltransferase | SAMN05444680_1127 | Not Available | Positive | 5025168 - 5026361 | 42664.2 |
| hypothetical protein | SAMN05444680_1128 | Not Available | Positive | 5026358 - 5026780 | 16014.5 |
| nipsnap protein | SAMN05444680_1129 | Not Available | Positive | 5026797 - 5027123 | 12173.6 |
| transcriptional regulator, gntr family | SAMN05444680_11210 | Not Available | Positive | 5027151 - 5027909 | 28165.9 |
| fumarate reductase flavoprotein subunit | SAMN05444680_11211 | Not Available | Negative | 5027911 - 5029386 | 51665.8 |
| conserved hypothetical protein | SAMN05444680_11212 | Not Available | Negative | 5029383 - 5030060 | 24208.9 |
| chrr cupin-like domain-containing protein | SAMN05444680_11213 | Not Available | Negative | 5030057 - 5030458 | 14776.5 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444680_11214 | Not Available | Negative | 5030466 - 5031698 | 46160.6 |
| transcriptional regulator, gntr family | SAMN05444680_11215 | Not Available | Negative | 5031827 - 5032570 | 27447.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
