Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN05444680_111187 | Not Available | Negative | 5013501 - 5014508 | 36889.7 |
| moxr-like atpase | SAMN05444680_111188 | Not Available | Negative | 5014505 - 5015425 | 32766.8 |
| acetoin utilization deacetylase acuc | SAMN05444680_111189 | Not Available | Positive | 5015548 - 5016453 | 33091.4 |
| mechanosensitive ion channel | SAMN05444680_111190 | Not Available | Positive | 5016458 - 5017744 | 46530.4 |
| electron transfer flavoprotein beta subunit | SAMN05444680_111191 | Not Available | Positive | 5017898 - 5018640 | 26715.8 |
| electron transfer flavoprotein alpha subunit | SAMN05444680_1121 | Not Available | Positive | 5018641 - 5019231 | 19856.4 |
| replication region dna-binding n-term | SAMN05444680_1122 | Not Available | Negative | 5019439 - 5020494 | 38428.2 |
| transposase, is4 family | SAMN05444680_1123 | Not Available | Negative | 5020798 - 5021895 | 41238.4 |
| nipsnap protein | SAMN05444680_1124 | Not Available | Negative | 5022047 - 5022388 | 13118.0 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_1125 | Not Available | Negative | 5022372 - 5024135 | 62881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
