Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 2, paat family | SAMN05444680_111147 | Not Available | Positive | 4969053 - 4969706 | 23635.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_111148 | Not Available | Positive | 4969750 - 4970547 | 28377.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444680_111149 | Not Available | Positive | 4970575 - 4971348 | 28283.4 |
| sugar phosphate isomerase/epimerase | SAMN05444680_111150 | Not Available | Positive | 4971348 - 4972097 | 26166.6 |
| 2-dehydro-3-deoxygluconokinase | SAMN05444680_111151 | Not Available | Positive | 4972094 - 4973044 | 33480.9 |
| gluconate 2-dehydrogenase | SAMN05444680_111152 | Not Available | Positive | 4973041 - 4974027 | 35325.7 |
| transcriptional regulator, laci family | SAMN05444680_111153 | Not Available | Positive | 4974042 - 4975067 | 35996.4 |
| serine/threonine-protein kinase hipa | SAMN05444680_111154 | Not Available | Negative | 4975084 - 4976415 | 49359.1 |
| transcriptional regulator, xre family | SAMN05444680_111155 | Not Available | Negative | 4976408 - 4976707 | 10507.9 |
| putative cyclase | SAMN05444680_111156 | Not Available | Negative | 4976887 - 4977036 | 5541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
