Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444680_111137 | Not Available | Negative | 4953559 - 4954776 | 43036.7 |
| dna topoisomerase iv subunit b | SAMN05444680_111138 | Not Available | Positive | 4954916 - 4956913 | 72459.4 |
| transglycosylase slt domain-containing protein | SAMN05444680_111139 | Not Available | Positive | 4957039 - 4957875 | 29716.7 |
| dna topoisomerase iv subunit a | SAMN05444680_111140 | Not Available | Positive | 4957949 - 4960330 | 85548.3 |
| hypothetical protein | SAMN05444680_111141 | Not Available | Positive | 4960354 - 4960539 | 7031.63 |
| heptose-i-phosphate ethanolaminephosphotransferase | SAMN05444680_111142 | Not Available | Negative | 4960546 - 4962159 | 59934.8 |
| patatin-like phospholipase | SAMN05444680_111143 | Not Available | Positive | 4962394 - 4965957 | 126957.0 |
| hypothetical protein | SAMN05444680_111144 | Not Available | Positive | 4966044 - 4966361 | 11604.7 |
| hypothetical protein | SAMN05444680_111145 | Not Available | Negative | 4966531 - 4968249 | 65277.1 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444680_111146 | Not Available | Positive | 4968376 - 4969047 | 24829.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
