Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_111127 | Not Available | Positive | 4945680 - 4946186 | 19344.8 |
| hypothetical protein | SAMN05444680_111128 | Not Available | Positive | 4946280 - 4946534 | 8023.36 |
| ca2+-binding protein, ef-hand superfamily | SAMN05444680_111129 | Not Available | Negative | 4946593 - 4947522 | 30831.0 |
| two component transcriptional regulator, winged helix family | SAMN05444680_111130 | Not Available | Positive | 4947739 - 4948491 | 28150.2 |
| protein-histidine pros-kinase | SAMN05444680_111131 | Not Available | Positive | 4948491 - 4949534 | 38476.7 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN05444680_111132 | Not Available | Negative | 4949607 - 4950383 | 28099.6 |
| beta-barrel assembly machine subunit bamc | SAMN05444680_111133 | Not Available | Negative | 4950536 - 4951624 | 39752.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444680_111134 | Not Available | Negative | 4951735 - 4952661 | 33254.6 |
| hypothetical protein | SAMN05444680_111135 | Not Available | Negative | 4952707 - 4953156 | 15964.0 |
| hypothetical protein | SAMN05444680_111136 | Not Available | Negative | 4953258 - 4953404 | 5184.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
