Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsb | SAMN05444680_111117 | Not Available | Negative | 4936960 - 4937235 | 10436.8 |
| enolase | SAMN05444680_111118 | Not Available | Negative | 4937363 - 4938646 | 45754.4 |
| uncharacterized conserved protein, duf1330 family | SAMN05444680_111119 | Not Available | Negative | 4938666 - 4938956 | 10740.9 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05444680_111120 | Not Available | Negative | 4938953 - 4939810 | 30488.8 |
| ctp synthase | SAMN05444680_111121 | Not Available | Negative | 4939807 - 4941477 | 61496.7 |
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN05444680_111122 | Not Available | Positive | 4941551 - 4942792 | 44239.6 |
| dutp pyrophosphatase | SAMN05444680_111123 | Not Available | Positive | 4942821 - 4943267 | 15907.3 |
| outer membrane lipoprotein slyb | SAMN05444680_111124 | Not Available | Positive | 4943457 - 4943951 | 16736.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN05444680_111125 | Not Available | Negative | 4944012 - 4944536 | 18744.1 |
| 50s ribosomal protein l16 3-hydroxylase | SAMN05444680_111126 | Not Available | Positive | 4944551 - 4945690 | 42386.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
